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Gm39786 predicted gene, 39786 [ Mus musculus (house mouse) ]

Gene ID: 105244113, updated on 22-Oct-2024

Summary

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Official Symbol
Gm39786provided by MGI
Official Full Name
predicted gene, 39786provided by MGI
Primary source
MGI:MGI:5622671
See related
Ensembl:ENSMUSG00000139796 AllianceGenome:MGI:5622671
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in testis adult (RPKM 1.5), heart adult (RPKM 0.6) and 7 other tissues See more
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Genomic context

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See Gm39786 in Genome Data Viewer
Location:
2 B; 2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (30878262..30886621, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (30988250..30996609, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene torsin family 1, member B Neighboring gene torsin family 1, member A (torsin A) Neighboring gene cDNA sequence BC005624 Neighboring gene ubiquitin specific peptidase 20 Neighboring gene formin binding protein 1 Neighboring gene STARR-positive B cell enhancer ABC_E9195 Neighboring gene STARR-positive B cell enhancer ABC_E4431 Neighboring gene STARR-seq mESC enhancer starr_04135 Neighboring gene STARR-positive B cell enhancer ABC_E4432 Neighboring gene STARR-positive B cell enhancer ABC_E9196 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:30971715-30971947 Neighboring gene STARR-positive B cell enhancer ABC_E5904 Neighboring gene RIKEN cDNA D330023K18 gene Neighboring gene G protein-coupled receptor 107

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    30878262..30886621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003954022.1 RNA Sequence

  2. XR_003954024.1 RNA Sequence

  3. XR_866116.2 RNA Sequence

    Related
    ENSMUST00000355470.1

  4. XR_003954021.1 RNA Sequence

  5. XR_003954023.1 RNA Sequence

  6. XR_866119.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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