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Gm39886 predicted gene, 39886 [ Mus musculus (house mouse) ]

Gene ID: 105244243, updated on 17-Aug-2024

Summary

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Official Symbol
Gm39886provided by MGI
Official Full Name
predicted gene, 39886provided by MGI
Primary source
MGI:MGI:5622771
See related
AllianceGenome:MGI:5622771
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm39886 in Genome Data Viewer
Location:
2 E2; 2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (101243606..101289441, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (101413261..101458277, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene pyruvate kinase, muscle pseudogene Neighboring gene pyruvate kinase, muscle pseudogene Neighboring gene STARR-seq mESC enhancer starr_05223 Neighboring gene STARR-seq mESC enhancer starr_05224 Neighboring gene STARR-seq mESC enhancer starr_05225 Neighboring gene STARR-seq mESC enhancer starr_05226 Neighboring gene STARR-seq mESC enhancer starr_05227 Neighboring gene STARR-seq mESC enhancer starr_05228 Neighboring gene STARR-seq mESC enhancer starr_05229 Neighboring gene STARR-positive B cell enhancer mm9_chr2:101312844-101313145 Neighboring gene STARR-seq mESC enhancer starr_05230 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:101391576-101391907 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:101392526-101392727 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:101403351-101403564 Neighboring gene VISTA enhancer mm1328 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:101448688-101449009 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:101464796-101464979 Neighboring gene predicted gene, 39887 Neighboring gene intraflagellar transport associated protein Neighboring gene recombination activating gene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    101243606..101289441 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_866574.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials