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Gm40348 predicted gene, 40348 [ Mus musculus (house mouse) ]

Gene ID: 105244802, updated on 17-Aug-2024

Summary

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Official Symbol
Gm40348provided by MGI
Official Full Name
predicted gene, 40348provided by MGI
Primary source
MGI:MGI:5623233
See related
AllianceGenome:MGI:5623233
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm42562
Expression
Biased expression in colon adult (RPKM 1.7), large intestine adult (RPKM 1.3) and 4 other tissues See more
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Genomic context

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See Gm40348 in Genome Data Viewer
Location:
5 G2; 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (137199192..137209688)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (137162253..137172944)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene serine (or cysteine) peptidase inhibitor, clade E, member 1 Neighboring gene STARR-seq mESC enhancer starr_14636 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:137579031-137579214 Neighboring gene tripartite motif-containing 56 Neighboring gene mucin 17, cell surface associated Neighboring gene predicted gene, 31160 Neighboring gene peptidyl-prolyl cis-trans isomerase G-like Neighboring gene mucin 3A, cell surface associated

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    137199192..137209688
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_868607.3 RNA Sequence

  2. XR_868606.3 RNA Sequence

  3. XR_868608.4 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials