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Gm41556 predicted gene, 41556 [ Mus musculus (house mouse) ]

Gene ID: 105246248, updated on 17-Aug-2024

Summary

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Official Symbol
Gm41556provided by MGI
Official Full Name
predicted gene, 41556provided by MGI
Primary source
MGI:MGI:5624441
See related
AllianceGenome:MGI:5624441
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm41556 in Genome Data Viewer
Location:
17 A3.3; 17
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (29274119..29278527)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (29056348..29059553)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_42246 Neighboring gene predicted gene 16196 Neighboring gene STARR-seq mESC enhancer starr_42249 Neighboring gene serine and arginine-rich splicing factor 3 Neighboring gene STARR-seq mESC enhancer starr_42251 Neighboring gene tumor protein p53 pathway corepressor 1 Neighboring gene STARR-seq mESC enhancer starr_42255 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:29218945-29219128 Neighboring gene STARR-seq mESC enhancer starr_42257 Neighboring gene STARR-seq mESC enhancer starr_42258 Neighboring gene cyclin dependent kinase inhibitor 1A Neighboring gene STARR-positive B cell enhancer mm9_chr17:29239826-29240127 Neighboring gene STARR-positive B cell enhancer mm9_chr17:29243389-29243689 Neighboring gene STARR-positive B cell enhancer mm9_chr17:29243839-29244139 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:29255128-29255329 Neighboring gene RAB44, member RAS oncogene family Neighboring gene ribosomal protein L35A, pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    29274119..29278527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004939696.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials