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LOC105370077 uncharacterized LOC105370077 [ Homo sapiens (human) ]

Gene ID: 105370077, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105370077
Gene description
uncharacterized LOC105370077
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105370077 in Genome Data Viewer
Location:
12q24.33
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (130067243..130071281, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (130104386..130108428, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903087 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130508431-130508932 Neighboring gene long intergenic non-protein coding RNA 2418 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:130529633-130530577 Neighboring gene Sharpr-MPRA regulatory region 1535 Neighboring gene NANOG hESC enhancer GRCh37_chr12:130560143-130560670 Neighboring gene long intergenic non-protein coding RNA 2419 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130571983-130572500 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130572501-130573018 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130597592-130598092 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130615286-130615803 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130615804-130616320 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:130616321-130616838 Neighboring gene uncharacterized LOC124903088 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25699 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_25704

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    130067243..130071281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_945550.1 RNA Sequence

  2. XR_945546.2 RNA Sequence

  3. XR_001749395.2 RNA Sequence

  4. XR_945548.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    130104386..130108428 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007083256.1 RNA Sequence

  2. XR_007083255.1 RNA Sequence

  3. XR_007083257.1 RNA Sequence

  4. XR_007083254.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials