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LINC02852 long intergenic non-protein coding RNA 2852 [ Homo sapiens (human) ]

Gene ID: 105370985, updated on 10-Dec-2024

Summary

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Official Symbol
LINC02852provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2852provided by HGNC
Primary source
HGNC:HGNC:54388
See related
Ensembl:ENSG00000285866 AllianceGenome:HGNC:54388
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LINC02852 in Genome Data Viewer
Location:
15q26.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (94583512..94589256, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (92347553..92353297, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370984 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10134 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6851 Neighboring gene multiple C2 and transmembrane domain containing 2 Neighboring gene ribosomal protein L26 pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10135 Neighboring gene uncharacterized LOC105370986 Neighboring gene uncharacterized LOC105370987

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    94583512..94589256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_932641.4 RNA Sequence

    Related
    ENST00000647740.2

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    92347553..92353297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007085521.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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