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LOC105373331 uncharacterized LOC105373331 [ Homo sapiens (human) ]

Gene ID: 105373331, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105373331
Gene description
uncharacterized LOC105373331
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in prostate (RPKM 6.4), brain (RPKM 5.9) and 16 other tissues See more
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Genomic context

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See LOC105373331 in Genome Data Viewer
Location:
Xq25
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (124380907..124389830)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (122691278..122700205)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene TEX13 family member D Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chrX:123539864-123541063 Neighboring gene SH2 domain containing 1A Neighboring gene teneurin transmembrane protein 1 Neighboring gene NANOG hESC enhancer GRCh37_chrX:123622217-123622915 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:123667881-123668476 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:123668477-123669070 Neighboring gene ribosomal protein S26 pseudogene 57 Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    124380907..124389830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_938576.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    122691278..122700205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007091077.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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