U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105373601 uncharacterized LOC105373601 [ Homo sapiens (human) ]

Gene ID: 105373601, updated on 10-Dec-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105373601
Gene description
uncharacterized LOC105373601
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105373601 in Genome Data Viewer
Location:
2q14.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (126443977..126461948)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (126881040..126899011)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1941 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr2:126918657-126919158 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr2:126919159-126919658 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:126940752-126941297 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:127065865-127066365 Neighboring gene SLC6A14 pseudogene 3 Neighboring gene MPRA-validated peak3851 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:127128995-127129494 Neighboring gene uncharacterized LOC105373602 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16475 Neighboring gene CRISPRi-validated cis-regulatory element chr2.4504 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16476 Neighboring gene CRISPRi-validated cis-regulatory element chr2.4505 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16477 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11926 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:127414467-127415306 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16480 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11927 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:127427919-127428462 Neighboring gene glycophorin C (Gerbich blood group)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    126443977..126461948
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_923302.1 RNA Sequence

  2. XR_923303.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    126881040..126899011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007072470.1 RNA Sequence

  2. XR_007072471.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials