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LOC105374298 keratinocyte proline-rich protein-like [ Homo sapiens (human) ]

Gene ID: 105374298, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105374298
Gene description
keratinocyte proline-rich protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Annotation information
Annotation category: only annotated on alternate loci in reference assembly
Expression
Broad expression in testis (RPKM 2.6), thyroid (RPKM 2.3) and 24 other tissues See more
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Genomic context

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See LOC105374298 in Genome Data Viewer
Location:
3q29
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 (ALT_REF_LOCI_4) NT_187688.1 (152320..160770, complement)

NT_187688.1Genomic Context describing neighboring genes Neighboring gene MIR570 host gene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195410973-195411692 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:195410251-195410972 Neighboring gene SDHA pseudogene 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:195408429-195408928 Neighboring gene uncharacterized LOC105374297 Neighboring gene serine/threonine-protein phosphatase 4 regulatory subunit 2-like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:195373516-195374016 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:195359633-195360132

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_187688.1 Chromosome 3 Reference GRCh38.p14 ALT_REF_LOCI_4

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Variation

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See studies and variants in dbVar

General protein information

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Preferred Names
keratinocyte proline-rich protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 ALT_REF_LOCI_4

Genomic

  1. NT_187688.1 Reference GRCh38.p14 ALT_REF_LOCI_4

    Range
    152320..160770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047442984.1 → XP_047298940.1  keratinocyte proline-rich protein-like

Nucleotide Protein
Heading Accession and Version

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