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LOC105374703 uncharacterized LOC105374703 [ Homo sapiens (human) ]

Gene ID: 105374703, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105374703
Gene description
uncharacterized LOC105374703
See related
Ensembl:ENSG00000296733
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward prostate (RPKM 7.5) See more
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Genomic context

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See LOC105374703 in Genome Data Viewer
Location:
5p13.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (29793730..29814388)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (29907875..29928549)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene aurora kinase A interacting protein 1 pseudogene Neighboring gene ubiquitin like 5 pseudogene 1 Neighboring gene MPRA-validated peak5212 silencer Neighboring gene MPRA-validated peak5213 silencer Neighboring gene MPRA-validated peak5214 silencer Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:29795280-29796479 Neighboring gene ZCCHC10 pseudogene 2 Neighboring gene uncharacterized LOC105374704 Neighboring gene piggyBac transposable element derived 3 pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    29793730..29814388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_925886.2 RNA Sequence

    Related
    ENST00000741457.1

  2. XR_925887.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    29907875..29928549
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007076304.1 RNA Sequence

  2. XR_007076305.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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