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LOC105374796 uncharacterized LOC105374796 [ Homo sapiens (human) ]

Gene ID: 105374796, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105374796
Gene description
uncharacterized LOC105374796
See related
Ensembl:ENSG00000228384
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105374796 in Genome Data Viewer
Location:
2p13.3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (71001258..71002934)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (71012274..71013950)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374795 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11615 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11616 Neighboring gene ankyrin repeat domain 53 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:71211464-71212011 Neighboring gene testis expressed 261 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11617 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11618 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16010 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:71227938-71228890 Neighboring gene olfactory receptor family 7 subfamily E member 91 pseudogene Neighboring gene olfactory receptor family 7 subfamily E member 46 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

General gene information

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Clone Names

  • AC007040.6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    71001258..71002934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_940232.3 RNA Sequence

    Related
    ENST00000760476.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    71012274..71013950
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007072192.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Research Materials