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LOC105375114 uncharacterized LOC105375114 [ Homo sapiens (human) ]

Gene ID: 105375114, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105375114
Gene description
uncharacterized LOC105375114
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375114 in Genome Data Viewer
Location:
7p22.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (112656..119431, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (212969..219626, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene putative protein FAM157B Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr7:40498-41441 Neighboring gene uncharacterized LOC105375113 Neighboring gene uncharacterized LOC101929756 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:81530-82302 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:82303-83073 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:84367-85090 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:85091-85814 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:86539-87262 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:89543-90191 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:96283-97052 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:97053-97823 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:108674-109390 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:119835-120053 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:133814-134316 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:134317-134819 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:139089-139857 Neighboring gene Sharpr-MPRA regulatory region 13780 Neighboring gene long intergenic non-protein coding RNA 3015 Neighboring gene long intergenic non-protein coding RNA 3014

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    112656..119431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_926959.3 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021159998.1 Reference GRCh38.p14 PATCHES

    Range
    88344..95119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007069132.1 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_2

Genomic

  1. NT_187653.1 Reference GRCh38.p14 ALT_REF_LOCI_2

    Range
    104977..111752 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_952314.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    212969..219626 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078202.1 RNA Sequence

  2. XR_007078203.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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