U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105375880 uncharacterized LOC105375880 [ Homo sapiens (human) ]

Gene ID: 105375880, updated on 22-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105375880
Gene description
uncharacterized LOC105375880
See related
Ensembl:ENSG00000296110
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105375880 in Genome Data Viewer
Location:
8q12.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (65006908..65017815)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (65432141..65443045)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:65499285-65499928 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:65499929-65500572 Neighboring gene NANOG hESC enhancer GRCh37_chr8:65522320-65522853 Neighboring gene cytochrome P450 family 7 subfamily B member 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27456 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27457 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19243 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19244 Neighboring gene uncharacterized LOC105375879 Neighboring gene uncharacterized LOC105375878 Neighboring gene NANOG hESC enhancer GRCh37_chr8:65843197-65843698 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:66032098-66033297 Neighboring gene NANOG hESC enhancer GRCh37_chr8:66042550-66043074 Neighboring gene NANOG hESC enhancer GRCh37_chr8:66044843-66045344 Neighboring gene NANOG hESC enhancer GRCh37_chr8:66082861-66083386 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:66084099-66085298 Neighboring gene long intergenic non-protein coding RNA 251 Neighboring gene ribosomal protein L31 pseudogene 41

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    65006908..65017815
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_928993.2 RNA Sequence

    Related
    ENST00000736475.1

  2. XR_928994.2 RNA Sequence

    Related
    ENST00000736474.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    65432141..65443045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079091.1 RNA Sequence

  2. XR_007079092.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials