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LOC105376107 uncharacterized LOC105376107 [ Homo sapiens (human) ]

Gene ID: 105376107, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105376107
Gene description
uncharacterized LOC105376107
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105376107 in Genome Data Viewer
Location:
9q21.32
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (81977245..82355386)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (94126888..94505007)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376105 Neighboring gene SPATA31 subfamily D member 3 Neighboring gene SPATA31 subfamily D member 2, pseudogene Neighboring gene SPATA31 subfamily D member 1 Neighboring gene SPATA31 subfamily B member 1, pseudogene Neighboring gene DEAD-box helicase 10 pseudogene 2 Neighboring gene ribosomal protein S2 pseudogene 34 Neighboring gene NANOG hESC enhancer GRCh37_chr9:84785175-84785704 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:84887382-84888581 Neighboring gene VISTA enhancer hs752 Neighboring gene VISTA enhancer hs800 Neighboring gene uncharacterized LOC112268046 Neighboring gene MT-CO3 pseudogene 40

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    81977245..82355386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002956914.2 RNA Sequence

  2. XR_002956915.2 RNA Sequence

  3. XR_002956913.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    94126888..94505007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079594.1 RNA Sequence

  2. XR_007079593.1 RNA Sequence

  3. XR_007079592.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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