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LOC105377801 uncharacterized LOC105377801 [ Homo sapiens (human) ]

Gene ID: 105377801, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105377801
Gene description
uncharacterized LOC105377801
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105377801 in Genome Data Viewer
Location:
8p23.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (7520334..7520815)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (7239898..7240379)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene defensin beta 105B Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:7355424-7355932 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:7355933-7356439 Neighboring gene defensin beta 107B Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:7363397-7364330 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:7364331-7365262 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:7375141-7376018 Neighboring gene proline-rich protein 23D1-like Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:7386403-7386942 Neighboring gene proline rich 23 domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    7520334..7520815
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_941389.2 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_018654717.1 Reference GRCh38.p14 PATCHES

    Range
    5397450..5397931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007069106.1 RNA Sequence

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187570.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    203437..203918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_951740.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    7239898..7240379
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078674.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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