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LOC105378193 uncharacterized LOC105378193 [ Homo sapiens (human) ]

Gene ID: 105378193, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105378193
Gene description
uncharacterized LOC105378193
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105378193 in Genome Data Viewer
Location:
13q34
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (112013971..112014948, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102724510 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112506195-112507184 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112507185-112508174 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112513428-112514170 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr13:112514171-112514912 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:112547335-112548032 Neighboring gene long intergenic non-protein coding RNA 354 Neighboring gene SOX1 overlapping transcript Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112666027-112666570 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:112682419-112682919 Neighboring gene small nucleolar RNA SNORD44 Neighboring gene MPRA-validated peak2105 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:112710313-112711042 Neighboring gene SRY-box transcription factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000013.11 Chromosome 13 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    112013971..112014948 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007063876.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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