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LOC105379484 uncharacterized LOC105379484 [ Homo sapiens (human) ]

Gene ID: 105379484, updated on 10-Dec-2024

Summary

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Gene symbol
LOC105379484
Gene description
uncharacterized LOC105379484
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Annotation information
Note: GeneID:105379484 is on a scaffold that is thought to be a false duplication and thus this gene is likely redundant with GeneID:105372833. [10 Jun 2021]
Expression
Biased expression in kidney (RPKM 2.1), liver (RPKM 1.4) and 4 other tissues See more
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Genomic context

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See LOC105379484 in Genome Data Viewer
Location:
21p12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (5010454..5013683, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene DNA (cytosine-5)-methyltransferase 3-like Neighboring gene ICOS ligand Neighboring gene uncharacterized LOC124905052 Neighboring gene uncharacterized LOC124900468

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000021.9 Chromosome 21 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    5010454..5013683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_951076.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials