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ZNF333 zinc finger protein 333 [ Ovis aries (sheep) ]

Gene ID: 105610504, updated on 13-Mar-2024

Summary

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Gene symbol
ZNF333
Gene description
zinc finger protein 333
See related
EnsemblRapid:ENSOARG00020029657
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human all
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Genomic context

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See ZNF333 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 5 NC_056058.1 (9384788..9413876, complement)

Chromosome 5 - NC_056058.1Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor E2 Neighboring gene protein SET-like Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene U6 spliceosomal RNA Neighboring gene adhesion G protein-coupled receptor E3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056058.1 Chromosome 5 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 333

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056058.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    9384788..9413876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042249787.2 → XP_042105721.1  zinc finger protein 333 isoform X5

    Conserved Domains (3) summary
    smart00349
    Location:167 → 227
    KRAB; krueppel associated box
    COG5048
    Location:369 → 604
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:416 → 436
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_060416262.1 → XP_060272245.1  zinc finger protein 333 isoform X3

  3. XM_012177785.5 → XP_012033175.1  zinc finger protein 333 isoform X4

    UniProtKB/TrEMBL
    A0A6P3TND3, W5P4P8
    Related
    ENSOARP00020041872.1, ENSOART00020044793.1
    Conserved Domains (5) summary
    cd07765
    Location:4 → 40
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    smart00349
    Location:168 → 228
    KRAB; krueppel associated box
    COG5048
    Location:370 → 605
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:417 → 437
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:331 → 353
    zf-C2H2; Zinc finger, C2H2 type

  4. XM_042249785.2 → XP_042105719.1  zinc finger protein 333 isoform X5

    Conserved Domains (3) summary
    smart00349
    Location:167 → 227
    KRAB; krueppel associated box
    COG5048
    Location:369 → 604
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:416 → 436
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_012177781.5 → XP_012033171.1  zinc finger protein 333 isoform X2

    Related
    ENSOARP00020050505.1, ENSOART00020073074.1
    Conserved Domains (6) summary
    smart00349
    Location:201 → 261
    KRAB; krueppel associated box
    COG5048
    Location:403 → 638
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:450 → 470
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:448 → 470
    zf-C2H2; Zinc finger, C2H2 type
    pfam01352
    Location:201 → 240
    KRAB; KRAB box
    pfam13465
    Location:547 → 569
    zf-H2C2_2; Zinc-finger double domain

  6. XM_012177780.5 → XP_012033170.1  zinc finger protein 333 isoform X1

    Conserved Domains (6) summary
    smart00349
    Location:202 → 262
    KRAB; krueppel associated box
    COG5048
    Location:404 → 639
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:451 → 471
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:449 → 471
    zf-C2H2; Zinc finger, C2H2 type
    pfam01352
    Location:202 → 241
    KRAB; KRAB box
    pfam13465
    Location:548 → 570
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
Heading Accession and Version

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