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ND-75 NADH dehydrogenase (ubiquinone) 75 kDa subunit [ Linepithema humile (Argentine ant) ]

Gene ID: 105679989, updated on 10-Oct-2024

Summary

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Gene symbol
ND-75
Gene description
NADH dehydrogenase (ubiquinone) 75 kDa subunit
See related
EnsemblRapid:LOC105679989
Gene type
protein coding
RefSeq status
MODEL
Organism
Linepithema humile
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dolichoderinae; Linepithema
Orthologs
fruit fly honey bee all
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Genomic context

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See ND-75 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current Lhum_UNIL_v1.0 (GCF_040581485.1) 2 NC_090129.1 (9827422..9831598)
100 previous assembly Lhum_UMD_V04 (GCF_000217595.1) Unplaced Scaffold NW_012160344.1 (28468..32488, complement)

Chromosome 2 - NC_090129.1Genomic Context describing neighboring genes Neighboring gene nucleolar MIF4G domain-containing protein 1 Neighboring gene lysozyme Neighboring gene elongation factor 1-beta Neighboring gene General vesicular transport factor p115 Neighboring gene uncharacterized LOC105679945 Neighboring gene uncharacterized LOC136998209

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome of the globally widespread and invasive Argentine ant (Linepithema humile). Smith CD, et al. Proc Natl Acad Sci U S A, 2011 Apr 5. PMID 21282631, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NADH dehydrogenase (ubiquinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP synthesis coupled electron transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular respiration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040581485.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lhum_UNIL_v1.0 Primary Assembly

Genomic

  1. NC_090129.1 Reference Lhum_UNIL_v1.0 Primary Assembly

    Range
    9827422..9831598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012380368.2 → XP_012235791.1  NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial

    See identical proteins and their annotated locations for XP_012235791.1

    Related
    XP_012235791.1
    Conserved Domains (5) summary
    smart00929
    Location:115 → 155
    NADH-G_4Fe-4S_3; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
    PRK09130
    Location:33 → 727
    PRK09130; NADH dehydrogenase subunit G; Validated
    cd02773
    Location:255 → 632
    MopB_Res-Cmplx1_Nad11; MopB_Res_Cmplx1_Nad11: The second domain of the Nad11/75-kDa subunit of the NADH-quinone oxidoreductase/respiratory complex I/NADH dehydrogenase-1(NDH-1) of eukaryotes and the Nqo3/G subunit of alphaproteobacteria NDH-1. The NADH-quinone oxidoreductase ...
    pfam09326
    Location:676 → 715
    NADH_dhqG_C; NADH-ubiquinone oxidoreductase subunit G, C-terminal
    pfam13510
    Location:31 → 108
    Fer2_4; 2Fe-2S iron-sulfur cluster binding domain

  2. XM_012380366.2 → XP_012235789.1  NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial

    See identical proteins and their annotated locations for XP_012235789.1

    Related
    XP_012235789.1
    Conserved Domains (5) summary
    smart00929
    Location:115 → 155
    NADH-G_4Fe-4S_3; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
    PRK09130
    Location:33 → 727
    PRK09130; NADH dehydrogenase subunit G; Validated
    cd02773
    Location:255 → 632
    MopB_Res-Cmplx1_Nad11; MopB_Res_Cmplx1_Nad11: The second domain of the Nad11/75-kDa subunit of the NADH-quinone oxidoreductase/respiratory complex I/NADH dehydrogenase-1(NDH-1) of eukaryotes and the Nqo3/G subunit of alphaproteobacteria NDH-1. The NADH-quinone oxidoreductase ...
    pfam09326
    Location:676 → 715
    NADH_dhqG_C; NADH-ubiquinone oxidoreductase subunit G, C-terminal
    pfam13510
    Location:31 → 108
    Fer2_4; 2Fe-2S iron-sulfur cluster binding domain

  3. XM_012380369.2 → XP_012235792.1  NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial

    See identical proteins and their annotated locations for XP_012235792.1

    Related
    XP_012235792.1
    Conserved Domains (5) summary
    smart00929
    Location:115 → 155
    NADH-G_4Fe-4S_3; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
    PRK09130
    Location:33 → 727
    PRK09130; NADH dehydrogenase subunit G; Validated
    cd02773
    Location:255 → 632
    MopB_Res-Cmplx1_Nad11; MopB_Res_Cmplx1_Nad11: The second domain of the Nad11/75-kDa subunit of the NADH-quinone oxidoreductase/respiratory complex I/NADH dehydrogenase-1(NDH-1) of eukaryotes and the Nqo3/G subunit of alphaproteobacteria NDH-1. The NADH-quinone oxidoreductase ...
    pfam09326
    Location:676 → 715
    NADH_dhqG_C; NADH-ubiquinone oxidoreductase subunit G, C-terminal
    pfam13510
    Location:31 → 108
    Fer2_4; 2Fe-2S iron-sulfur cluster binding domain
Nucleotide Protein
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