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mIF2 mitochondrial translation initiation factor 2 [ Linepithema humile (Argentine ant) ]

Gene ID: 105680001, updated on 10-Oct-2024

Summary

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Gene symbol
mIF2
Gene description
mitochondrial translation initiation factor 2
See related
EnsemblRapid:LOC105680001
Gene type
protein coding
RefSeq status
MODEL
Organism
Linepithema humile
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dolichoderinae; Linepithema
Orthologs
fruit fly honey bee all
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Genomic context

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See mIF2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_08 current Lhum_UNIL_v1.0 (GCF_040581485.1) 2 NC_090129.1 (9617795..9639760, complement)
100 previous assembly Lhum_UMD_V04 (GCF_000217595.1) Unplaced Scaffold NW_012160344.1 (222790..226847)

Chromosome 2 - NC_090129.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105679957 Neighboring gene probable basic-leucine zipper transcription factor Q Neighboring gene uncharacterized LOC105680018 Neighboring gene uncharacterized LOC105680004 Neighboring gene uncharacterized LOC105680005 Neighboring gene quick-to-court Neighboring gene ribosomal protein L11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome of the globally widespread and invasive Argentine ant (Linepithema humile). Smith CD, et al. Proc Natl Acad Sci U S A, 2011 Apr 5. PMID 21282631, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
translation initiation factor IF-2, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040581485.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lhum_UNIL_v1.0 Primary Assembly

Genomic

  1. NC_090129.1 Reference Lhum_UNIL_v1.0 Primary Assembly

    Range
    9617795..9639760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012380383.2 → XP_012235806.1  translation initiation factor IF-2, mitochondrial isoform X2

    Related
    XP_012235806.1
    Conserved Domains (5) summary
    cd01887
    Location:167 → 330
    IF2_eIF5B; Initiation Factor 2 (IF2)/ eukaryotic Initiation Factor 5B (eIF5B) family
    COG0532
    Location:162 → 693
    InfB; Translation initiation factor IF-2, a GTPase [Translation, ribosomal structure and biogenesis]
    pfam11987
    Location:484 → 580
    IF-2; Translation-initiation factor 2
    cd03692
    Location:598 → 685
    mtIF2_IVc; C2 subdomain of domain IV in mitochondrial translation initiation factor 2
    cd03702
    Location:340 → 434
    IF2_mtIF2_II; Domain II of bacterial and mitochondrial Initiation Factor 2

  2. XM_012380382.2 → XP_012235805.2  translation initiation factor IF-2, mitochondrial isoform X1

  3. XM_067349066.1 → XP_067205167.1  translation initiation factor IF-2, mitochondrial isoform X1

  4. XM_067349067.1 → XP_067205168.1  translation initiation factor IF-2, mitochondrial isoform X1

  5. XM_067349068.1 → XP_067205169.1  translation initiation factor IF-2, mitochondrial isoform X1

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases