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Ilk integrin linked kinase [ Linepithema humile (Argentine ant) ]

Gene ID: 105680032, updated on 10-Oct-2024

Summary

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Gene symbol
Ilk
Gene description
integrin linked kinase
See related
EnsemblRapid:LOC105680032
Gene type
protein coding
RefSeq status
MODEL
Organism
Linepithema humile
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dolichoderinae; Linepithema
Orthologs
fruit fly honey bee all
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Genomic context

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See Ilk in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current Lhum_UNIL_v1.0 (GCF_040581485.1) 1 NC_090128.1 (23070639..23073890)
100 previous assembly Lhum_UMD_V04 (GCF_000217595.1) Unplaced Scaffold NW_012160348.1 (120658..123709, complement)

Chromosome 1 - NC_090128.1Genomic Context describing neighboring genes Neighboring gene homer protein Neighboring gene N-glycanase Pngl Neighboring gene uncharacterized LOC105680024 Neighboring gene prostaglandin E synthase Su(P) Neighboring gene intraflagellar transport protein Oseg1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome of the globally widespread and invasive Argentine ant (Linepithema humile). Smith CD, et al. Proc Natl Acad Sci U S A, 2011 Apr 5. PMID 21282631, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin-linked protein kinase homolog pat-4
Names
integrin-linked protein kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040581485.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lhum_UNIL_v1.0 Primary Assembly

Genomic

  1. NC_090128.1 Reference Lhum_UNIL_v1.0 Primary Assembly

    Range
    23070639..23073890
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012380448.2 → XP_012235871.1  integrin-linked protein kinase homolog pat-4

    Related
    XP_012235871.1
    Conserved Domains (5) summary
    cd00204
    Location:60 → 187
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam07714
    Location:238 → 476
    Pkinase_Tyr; Protein tyrosine kinase
    pfam12796
    Location:70 → 162
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:65 → 96
    ANK; ANK repeat [structural motif]
    cl21453
    Location:228 → 479
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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