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RNU6-224P RNA, U6 small nuclear 224, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479666, updated on 17-Sep-2024

Summary

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Official Symbol
RNU6-224Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 224, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47187
See related
Ensembl:ENSG00000206782 AllianceGenome:HGNC:47187
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-224P in Genome Data Viewer
Location:
4q28.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (131273242..131273348)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (134577010..134577116)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (132194397..132194503)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_74530 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_74536 Neighboring gene Sharpr-MPRA regulatory region 6093 Neighboring gene glyceraldehyde 3 phosphate dehydrogenase pseudogene 56 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:131553588-131554787 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:131567488-131567988 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:131688324-131689108 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:131934342-131934873 Neighboring gene uncharacterized LOC105377422 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:132130190-132130788 Neighboring gene uncharacterized LOC105377423 Neighboring gene long intergenic non-protein coding RNA 2377 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21903 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21904 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr4:132486813-132488012 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21905

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043325.1 

    Range
    101..207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    131273242..131273348
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    134577010..134577116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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