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RNU6-675P RNA, U6 small nuclear 675, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479864, updated on 17-Sep-2024

Summary

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Official Symbol
RNU6-675Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 675, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47638
See related
Ensembl:ENSG00000206963 AllianceGenome:HGNC:47638
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-675P in Genome Data Viewer
Location:
2q14.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (126702839..126702942, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (127139880..127139983, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (127460415..127460518, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373602 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16475 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16476 Neighboring gene CRISPRi-validated cis-regulatory element chr2.4504 Neighboring gene CRISPRi-validated cis-regulatory element chr2.4505 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16477 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11926 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:127414467-127415306 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16480 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11927 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:127427919-127428462 Neighboring gene glycophorin C (Gerbich blood group) Neighboring gene NANOG hESC enhancer GRCh37_chr2:127516252-127516753 Neighboring gene uncharacterized LOC124907882 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:127555119-127556318 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:127585337-127586060 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:127632091-127633290 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11928 Neighboring gene uncharacterized LOC105373603

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045201.1 

    Range
    101..204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    126702839..126702942 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    127139880..127139983 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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