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LOC106644176 general vesicular transport factor p115 [ Copidosoma floridanum ]

Gene ID: 106644176, updated on 22-Oct-2023

Summary

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Gene symbol
LOC106644176
Gene description
general vesicular transport factor p115
See related
EnsemblRapid:LOC106644176
Gene type
protein coding
RefSeq status
MODEL
Organism
Copidosoma floridanum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Encyrtidae; Encyrtinae; Copidosoma
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Genomic context

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See LOC106644176 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Cflo_2.0 (GCF_000648655.2) Unplaced Scaffold NW_019379759.1 (106329..187966, complement)
100 previous assembly Cflo_1.0 (GCF_000648655.1) Unplaced Scaffold NW_014327592.1 (107803..188784, complement)

NW_019379759.1Genomic Context describing neighboring genes Neighboring gene max-binding protein MNT-like Neighboring gene histone H4-like Neighboring gene histone H3, embryonic-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion with Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ER to Golgi transport vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general vesicular transport factor p115

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Copidosoma floridanum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cflo_2.0

Genomic

  1. NW_019379759.1 Reference Cflo_2.0

    Range
    106329..187966 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014359577.2 → XP_014215063.1  general vesicular transport factor p115

    Related
    XP_014215063.1, XM_014359577.2
    Conserved Domains (2) summary
    cd00020
    Location:121 → 212
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam04869
    Location:355 → 427
    Uso1_p115_head; Uso1 / p115 like vesicle tethering protein, head region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases