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Cda5 Chitin deacetylase-like 5 [ Dinoponera quadriceps ]

Gene ID: 106742321, updated on 10-Oct-2024

Summary

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Gene symbol
Cda5
Gene description
Chitin deacetylase-like 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Dinoponera quadriceps
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Ponerinae; Ponerini; Dinoponera
Orthologs
fruit fly honey bee all
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Genomic context

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See Cda5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM131382v1 (GCF_001313825.1) Unplaced Scaffold NW_014554836.1 (1816292..1898347)

NW_014554836.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106742288 Neighboring gene sodium channel protein Nach-like Neighboring gene exostosin glycosyltransferase 1 ttv Neighboring gene adenylate cyclase type 10-like Neighboring gene hunchback

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014554836.1 Unplaced Scaffold Reference ASM131382v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC106742321

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dinoponera quadriceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM131382v1

Genomic

  1. NW_014554836.1 Reference ASM131382v1

    Range
    1816292..1898347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014615172.1 → XP_014470658.1  uncharacterized protein LOC106742321 isoform X1

    UniProtKB/TrEMBL
    A0A6P3WX02
    Conserved Domains (2) summary
    cd10975
    Location:490 → 752
    CE4_CDA_like_2; Putative catalytic domain of chitin deacetylase-like proteins
    pfam01607
    Location:40 → 88
    CBM_14; Chitin binding Peritrophin-A domain

  2. XM_014615171.1 → XP_014470657.1  uncharacterized protein LOC106742321 isoform X2

    UniProtKB/TrEMBL
    A0A6P3WXL9
    Conserved Domains (2) summary
    cd10975
    Location:490 → 752
    CE4_CDA_like_2; Putative catalytic domain of chitin deacetylase-like proteins
    pfam01607
    Location:40 → 88
    CBM_14; Chitin binding Peritrophin-A domain

  3. XM_014615170.1 → XP_014470656.1  uncharacterized protein LOC106742321 isoform X1

    UniProtKB/TrEMBL
    A0A6P3WX02
    Conserved Domains (2) summary
    cd10975
    Location:490 → 752
    CE4_CDA_like_2; Putative catalytic domain of chitin deacetylase-like proteins
    pfam01607
    Location:40 → 88
    CBM_14; Chitin binding Peritrophin-A domain

  4. XM_014615173.1 → XP_014470659.1  uncharacterized protein LOC106742321 isoform X3

    UniProtKB/TrEMBL
    A0A6P3WYF4
    Conserved Domains (2) summary
    cd10975
    Location:476 → 738
    CE4_CDA_like_2; Putative catalytic domain of chitin deacetylase-like proteins
    pfam01607
    Location:40 → 88
    CBM_14; Chitin binding Peritrophin-A domain
Nucleotide Protein
Heading Accession and Version

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