U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107984379 uncharacterized LOC107984379 [ Homo sapiens (human) ]

Gene ID: 107984379, updated on 10-Dec-2024

Summary

Go to the top of the page Help
Gene symbol
LOC107984379
Gene description
uncharacterized LOC107984379
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107984379 in Genome Data Viewer
Location:
11q24.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (127229925..127231863)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (127262951..127264889)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101929473 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:126970468-126970708 Neighboring gene uncharacterized LOC105369562 Neighboring gene long intergenic non-protein coding RNA 2712 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:127180643-127181842 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:127190865-127191395 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_19685 Neighboring gene MPRA-validated peak1506 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:127262370-127262928 Neighboring gene RN7SK pseudogene 121

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    127229925..127231863
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001748080.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    127262951..127264889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007081826.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases