U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107984484 uncharacterized LOC107984484 [ Homo sapiens (human) ]

Gene ID: 107984484, updated on 10-Dec-2024

Summary

Go to the top of the page Help
Gene symbol
LOC107984484
Gene description
uncharacterized LOC107984484
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107984484 in Genome Data Viewer
Location:
12q12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (39058001..39059928, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (39007845..39009766, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene copine 8 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4345 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6196 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4346 Neighboring gene CPNE8 antisense RNA 1 Neighboring gene sucrase-isomaltase (alpha-glucosidase) pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:39456016-39456953 Neighboring gene long intergenic non-protein coding RNA 2406 Neighboring gene NANOG hESC enhancer GRCh37_chr12:39523406-39523907 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:39584065-39584264 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr12:39671001-39672200 Neighboring gene uncharacterized LOC101927019 Neighboring gene kinesin family member 21A

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    39058001..39059928 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001749078.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    39007845..39009766 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007083062.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases