U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107984551 uncharacterized LOC107984551 [ Homo sapiens (human) ]

Gene ID: 107984551, updated on 26-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC107984551
Gene description
uncharacterized LOC107984551
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in liver (RPKM 1.2), duodenum (RPKM 0.6) and 14 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107984551 in Genome Data Viewer
Location:
13q13.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (33679550..33687172)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (32896708..32904519)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene StAR related lipid transfer domain containing 13 Neighboring gene uncharacterized LOC124903152 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7579 Neighboring gene NANOG hESC enhancer GRCh37_chr13:33984305-33984872 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:34063621-34064197 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7580 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7581 Neighboring gene uncharacterized LOC102723406 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7582 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7583 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7584 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7585 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5256 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5257 Neighboring gene RNA, U5A small nuclear 4, pseudogene Neighboring gene replication factor C subunit 3 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:34514923-34515422 Neighboring gene uncharacterized LOC105370156

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    33679550..33687172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001749964.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    32896708..32904519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007083600.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases