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LOC107984954 uncharacterized LOC107984954 [ Homo sapiens (human) ]

Gene ID: 107984954, updated on 10-Dec-2024

Summary

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Gene symbol
LOC107984954
Gene description
uncharacterized LOC107984954
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107984954 in Genome Data Viewer
Location:
1p33
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (49492203..49517561)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (49370893..49392946)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene AGBL carboxypeptidase 4 Neighboring gene AGBL4 antisense RNA 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:49872569-49872784 Neighboring gene AGBL4 intronic transcript 1 Neighboring gene zinc finger protein 859, pseudogene Neighboring gene MT-ND2 pseudogene 29

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    49492203..49517561
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007066075.1 RNA Sequence

  2. XR_001738043.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    49370893..49392946
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007070170.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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