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ARHGEF2-AS1 ARHGEF2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 107985210, updated on 17-Sep-2024

Summary

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Official Symbol
ARHGEF2-AS1provided by HGNC
Official Full Name
ARHGEF2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40082
See related
Ensembl:ENSG00000224276 AllianceGenome:HGNC:40082
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in lung (RPKM 2.3), stomach (RPKM 1.4) and 6 other tissues See more
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Genomic context

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See ARHGEF2-AS1 in Genome Data Viewer
Location:
1q22
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (155991374..156001787)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (155129538..155139937)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene Rho/Rac guanine nucleotide exchange factor 2 Neighboring gene microRNA 6738 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1410 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:155931313-155932512 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:155937888-155938119 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1825 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1826 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1827 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1828 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:155946115-155946616 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1829 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1411 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1412 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1830 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:155949474-155950095 Neighboring gene ARHGEF2 antisense RNA 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1832 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:155953219-155953718 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1833 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1834 Neighboring gene uncharacterized LOC105371729 Neighboring gene signal sequence receptor subunit 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1414 Neighboring gene ubiquilin 4 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:156022535-156023256 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1415 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1416

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    155991374..156001787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001738248.2 RNA Sequence

    Related
    ENST00000415726.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    155129538..155139937
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007070753.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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