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LOC107985342 uncharacterized LOC107985342 [ Homo sapiens (human) ]

Gene ID: 107985342, updated on 10-Dec-2024

Summary

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Gene symbol
LOC107985342
Gene description
uncharacterized LOC107985342
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107985342 in Genome Data Viewer
Location:
19q13.42
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (53648048..53694622)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (56727585..56774140)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene divergent-paired related homeobox Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:54122202-54122702 Neighboring gene oligosaccharyltransferase complex subunit pseudogene 3 Neighboring gene RNA, 7SL, cytoplasmic 317, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:54140228-54140728 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:54146969-54147762 Neighboring gene RNA, U6 small nuclear 698, pseudogene Neighboring gene nuclear RNA export factor 3 pseudogene Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:54163595-54164484 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:54164485-54165374 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr19:54167967-54168856 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr19:54168857-54169744 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:54169745-54170633 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:54171522-54172410 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:54172411-54173298 Neighboring gene microRNA 512-1 Neighboring gene microRNA 512-2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:54180949-54181449 Neighboring gene microRNA 1323 Neighboring gene microRNA 498 Neighboring gene microRNA 520e Neighboring gene microRNA 515-1 Neighboring gene microRNA 519e Neighboring gene microRNA 520f Neighboring gene microRNA 515-2 Neighboring gene microRNA 1283-1 Neighboring gene microRNA 519c Neighboring gene microRNA 520a Neighboring gene microRNA 526b Neighboring gene microRNA 519b Neighboring gene microRNA 525

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    53648048..53694622
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007067332.1 RNA Sequence

  2. XR_001753996.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    56727585..56774140
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_008485227.1 RNA Sequence

  2. XR_007089243.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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