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LOC107986193 uncharacterized LOC107986193 [ Homo sapiens (human) ]

Gene ID: 107986193, updated on 17-Sep-2024

Summary

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Gene symbol
LOC107986193
Gene description
uncharacterized LOC107986193
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107986193 in Genome Data Viewer
Location:
4q26
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (119389913..119395788)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (122695011..122699112)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene fatty acid binding protein 2 Neighboring gene kelch like family member 2 pseudogene 1 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:120263717-120264310 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:120268597-120269585 Neighboring gene RNA, U4 small nuclear 33, pseudogene Neighboring gene capicua transcriptional repressor pseudogene Neighboring gene glycerol kinase 6 pseudogene Neighboring gene long intergenic non-protein coding RNA 1061 Neighboring gene RNA, U6 small nuclear 1217, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    119389913..119395788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001741431.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    122695011..122699112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007074935.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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