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LOC107986675 uncharacterized LOC107986675 [ Homo sapiens (human) ]

Gene ID: 107986675, updated on 17-Sep-2024

Summary

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Gene symbol
LOC107986675
Gene description
uncharacterized LOC107986675
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107986675 in Genome Data Viewer
Location:
6q27
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (169959536..169982664)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (171315494..171338870)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene zinc finger protein 227-like Neighboring gene uncharacterized LOC107986674 Neighboring gene uncharacterized LOC100131532 Neighboring gene uncharacterized LOC105378150 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:170344536-170345041 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:170352442-170353175 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170368382-170368882 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170388707-170389258 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170389259-170389810 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170391695-170392194 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25466 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170406887-170407388 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:170432455-170433090 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr6:170440627-170441826 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170443766-170444266 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170444267-170444767 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:170462430-170463234 Neighboring gene proline-rich receptor-like protein kinase PERK10 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17801

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

General protein information

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Names
uncharacterized LOC107986675

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    169959536..169982664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001744484.3 RNA Sequence

  2. XR_001744486.3 RNA Sequence

  3. XR_001744485.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    171315494..171338870
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007077371.1 RNA Sequence

  2. XR_007077373.1 RNA Sequence

  3. XR_007077372.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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