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LOC107986787 uncharacterized LOC107986787 [ Homo sapiens (human) ]

Gene ID: 107986787, updated on 10-Dec-2024

Summary

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Gene symbol
LOC107986787
Gene description
uncharacterized LOC107986787
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107986787 in Genome Data Viewer
Location:
7p14.1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (41465823..41496092)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (41624095..41654358)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375241 Neighboring gene long intergenic non-protein coding RNA 1449 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18119 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25896 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25897 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25898 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:41174879-41175380 Neighboring gene uncharacterized LOC105375246 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:41507517-41508016 Neighboring gene uncharacterized LOC105379725 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:41631701-41632431 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:41665014-41666213 Neighboring gene uncharacterized LOC105375247

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    41465823..41496092
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001745183.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    41624095..41654358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078439.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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