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LOC107986847 uncharacterized LOC107986847 [ Homo sapiens (human) ]

Gene ID: 107986847, updated on 10-Dec-2024

Summary

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Gene symbol
LOC107986847
Gene description
uncharacterized LOC107986847
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in colon (RPKM 17.9), lung (RPKM 9.5) and 7 other tissues See more
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Genomic context

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See LOC107986847 in Genome Data Viewer
Location:
7q32.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (129368024..129377678, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (130680986..130690651, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene adenosylhomocysteinase like 2 Neighboring gene uncharacterized LOC124900234 Neighboring gene MPRA-validated peak6717 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:128979582-128980146 Neighboring gene uncharacterized LOC105375500 Neighboring gene OCT4-H3K27ac hESC enhancer GRCh37_chr7:129015095-129015655 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:129015656-129016215 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:129022382-129022566 Neighboring gene RNA, U7 small nuclear 16 pseudogene Neighboring gene cell division cycle 26 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    129368024..129377678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007060518.1 RNA Sequence

  2. XR_001745359.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    130680986..130690651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007077870.1 RNA Sequence

  2. XR_007077869.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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