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LOC107986895 uncharacterized LOC107986895 [ Homo sapiens (human) ]

Gene ID: 107986895, updated on 10-Dec-2024

Summary

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Gene symbol
LOC107986895
Gene description
uncharacterized LOC107986895
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107986895 in Genome Data Viewer
Location:
8q21.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (86763239..86783974)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (87883439..87904173)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chr8:87669862-87670033 Neighboring gene cyclic nucleotide gated channel subunit beta 3 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:87706251-87706896 Neighboring gene UBE2Q2 pseudogene 10 Neighboring gene GOLGA2 pseudogene 1 Neighboring gene cyclic nucleotide binding domain containing 1 Neighboring gene NANOG hESC enhancer GRCh37_chr8:87980781-87981282 Neighboring gene NANOG hESC enhancer GRCh37_chr8:88152834-88153335 Neighboring gene NANOG hESC enhancer GRCh37_chr8:88208643-88209144 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:88354821-88355336 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:88437867-88438368 Neighboring gene vesicle trafficking 1 pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    86763239..86783974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001745726.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    87883439..87904173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079205.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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