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Gm46981 predicted gene, 46981 [ Mus musculus (house mouse) ]

Gene ID: 108169178, updated on 17-Aug-2024

Summary

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Official Symbol
Gm46981provided by MGI
Official Full Name
predicted gene, 46981provided by MGI
Primary source
MGI:MGI:5826618
See related
AllianceGenome:MGI:5826618
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in duodenum adult (RPKM 1.1), small intestine adult (RPKM 0.6) and 9 other tissues See more
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Genomic context

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See Gm46981 in Genome Data Viewer
Location:
6 G2; 6
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (142729432..142732558)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (142783705..142786832)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 5330439B14 gene Neighboring gene ATP-binding cassette, sub-family C member 9 Neighboring gene STARR-seq mESC enhancer starr_17710 Neighboring gene STARR-positive B cell enhancer ABC_E10416 Neighboring gene predicted gene, 53249 Neighboring gene cytidine monophospho-N-acetylneuraminic acid synthetase Neighboring gene sulfotransferase family 6B, member 2 Neighboring gene predicted gene 7457 Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 Neighboring gene STARR-seq mESC enhancer starr_17714 Neighboring gene STARR-seq mESC enhancer starr_17715 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:142866014-142866248 Neighboring gene predicted gene 7468

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Global discovery of erythroid long noncoding RNAs reveals novel regulators of red cell maturation. Alvarez-Dominguez JR, et al. Blood, 2014 Jan 23. PMID 24200680, Free PMC Article
  2. Widespread and dynamic translational control of red blood cell development. Alvarez-Dominguez JR, et al. Blood, 2017 Feb 2. PMID 27899360, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    142729432..142732558
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001785407.3 RNA Sequence

  2. XR_003956545.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version