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LOC108190403 unconventional myosin-VIIa [ Danio rerio (zebrafish) ]

Gene ID: 108190403, updated on 3-Dec-2024

Summary

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Gene symbol
LOC108190403
Gene description
unconventional myosin-VIIa
See related
Ensembl:ENSDARG00000044441
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC108190403 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
46
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (28054671..28113577)
105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (28061450..28062030)

Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene angiomotin like 2a Neighboring gene Sin3A-associated protein a Neighboring gene si:ch73-194h10.3 Neighboring gene G protein-coupled receptor 17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
unconventional myosin-VIIa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007117.7 Reference GRCz11 Primary Assembly

    Range
    28054671..28113577
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068221979.1 → XP_068078080.1  unconventional myosin-VIIa isoform X1

    UniProtKB/TrEMBL
    A0A8M9QBI7
    Related
    ENSDARP00000115391.2, ENSDART00000143218.3

  2. XM_021477351.2 → XP_021333026.2  unconventional myosin-VIIa isoform X2

    UniProtKB/TrEMBL
    A0A8M9QBI7
    Related
    ENSDARP00000150136.1, ENSDART00000189194.1

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394645.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    19047..73782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021471765.2 → XP_021327440.2  unconventional myosin-VIIa isoform X2

    UniProtKB/TrEMBL
    A0A8M9Q206

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395255.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    17877..76080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068219212.1 → XP_068075313.1  unconventional myosin-VIIa isoform X1

    UniProtKB/TrEMBL
    A0A8M9QBI7

  2. XM_017356626.3 → XP_017212115.2  unconventional myosin-VIIa isoform X2

    UniProtKB/TrEMBL
    A0A8M6Z178, A0A8M9QBI7
    Conserved Domains (7) summary
    smart00015
    Location:727 → 749
    IQ; Calmodulin-binding motif
    smart00139
    Location:1700 → 1848
    MyTH4; Domain in Myosin and Kinesin Tails
    smart00295
    Location:1855 → 2067
    B41; Band 4.1 homologues
    cd13198
    Location:1469 → 1562
    FERM_C1_MyoVII; FERM domain C-lobe, repeat 1, of Myosin VII (MyoVII/Myo7)
    cd13199
    Location:2063 → 2158
    FERM_C2_MyoVII; FERM domain C-lobe, repeat 2, of Myosin VII (MyoVII, Myo7)
    cd01381
    Location:21 → 690
    MYSc_Myo7; class VII myosin, motor domain
    cl17036
    Location:1563 → 1624
    SH3; Src Homology 3 domain superfamily

Reference GRCz11 ALT_DRER_TU_3

Genomic

  1. NW_018395378.1 Reference GRCz11 ALT_DRER_TU_3

    Range
    19047..77812
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068219414.1 → XP_068075515.1  unconventional myosin-VIIa isoform X1

    UniProtKB/TrEMBL
    A0A8M9QBI7

  2. XM_021474600.2 → XP_021330275.2  unconventional myosin-VIIa isoform X2

    UniProtKB/TrEMBL
    A0A8M9QBI7
Nucleotide Protein Strain
Heading Accession and Version

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