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Trnac-gca36 transfer RNA cysteine (anticodon GCA) 36 [ Rattus norvegicus (Norway rat) ]

Gene ID: 108352239, updated on 17-Aug-2024

Summary

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Symbol
Trnac-gca36provided by RGD
Full Name
transfer RNA cysteine (anticodon GCA) 36provided by RGD
Primary source
RGD:11443179
See related
AllianceGenome:RGD:11443179
Gene type
tRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Trnac-gca
Summary
This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104).
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Genomic context

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See Trnac-gca36 in Genome Data Viewer
Location:
10q31
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (83480211..83480282, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (82983884..82983955, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (85939845..85939916, complement)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene F-box protein 47 Neighboring gene U7 small nuclear RNA Neighboring gene plexin domain containing 1 Neighboring gene uncharacterized LOC134480866 Neighboring gene transfer RNA cysteine (anticodon GCA) 37 Neighboring gene ARF like GTPase 5C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    83480211..83480282 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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