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LOC108719558 gastrula zinc finger protein XlCGF7.1-like [ Xenopus laevis (African clawed frog) ]

Gene ID: 108719558, updated on 10-Mar-2023

Summary

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Gene symbol
LOC108719558
Gene description
gastrula zinc finger protein XlCGF7.1-like
Locus tag
XELAEV_18030339mg
See related
EnsemblRapid:ENSXLAG00005034424
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See LOC108719558 in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (2114251..2126385)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (91590..106223)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 239-like Neighboring gene gastrula zinc finger protein XlCGF26.1-like Neighboring gene uncharacterized LOC108719503 Neighboring gene oocyte zinc finger protein XlCOF6-like Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene gastrula zinc finger protein XlCGF26.1-like Neighboring gene zinc finger protein 33A L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
gastrula zinc finger protein XlCGF7.1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    2114251..2126385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041566985.1 → XP_041422919.1  gastrula zinc finger protein XlCGF7.1-like

    UniProtKB/TrEMBL
    A0A1L8FUA5, A0A974HF12
    Related
    ENSXLAP00005102841.1, ENSXLAT00005104840.1
    Conserved Domains (2) summary
    COG5048
    Location:11 → 207
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:47 → 67
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_018268507.2 → XP_018123996.2  gastrula zinc finger protein XlCGF7.1-like

    UniProtKB/TrEMBL
    A0A1L8FUA5, A0A974HF12
    Conserved Domains (2) summary
    COG5048
    Location:11 → 207
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:47 → 67
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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