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fshb follicle stimulating hormone subunit beta [ Cyprinus carpio (common carp) ]

Gene ID: 109094212, updated on 12-Sep-2024

Summary

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Gene symbol
fshb
Gene description
follicle stimulating hormone subunit beta
See related
Ensembl:ENSCCRG00000016726
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Orthologs
zebrafish all
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Genomic context

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See fshb in Genome Data Viewer
Location:
chromosome: A7
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A7 NC_056578.1 (18998645..19004839)
100 previous assembly common carp genome (GCF_000951615.1) 14 NC_031710.1 (12076648..12084590)

Chromosome A7 - NC_056578.1Genomic Context describing neighboring genes Neighboring gene 12S rRNA N4-methylcytidine (m4C) methyltransferase-like Neighboring gene leucine-rich repeat-containing G-protein coupled receptor 4-like Neighboring gene potassium voltage-gated channel, shaker-related subfamily, member 4 Neighboring gene ARL14 effector protein-like Neighboring gene transcription factor PU.1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ovulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
follitropin subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056578.1 Reference ASM1834038v1 Primary Assembly

    Range
    18998645..19004839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019107905.2 → XP_018963450.2  follitropin subunit beta

    UniProtKB/TrEMBL
    A0A8C1BC83, A0A9Q9YAN1
    Conserved Domains (1) summary
    smart00068
    Location:22 → 128
    GHB; Glycoprotein hormone beta chain homologues

  2. XM_019107903.2 → XP_018963448.2  follitropin subunit beta

    UniProtKB/TrEMBL
    A0A8C1BC83, A0A9Q9YAN1
    Conserved Domains (1) summary
    smart00068
    Location:22 → 128
    GHB; Glycoprotein hormone beta chain homologues

  3. XM_042760127.1 → XP_042616061.1  follitropin subunit beta

    UniProtKB/TrEMBL
    A0A8C1BC83, A0A9Q9YAN1
    Conserved Domains (1) summary
    smart00068
    Location:22 → 128
    GHB; Glycoprotein hormone beta chain homologues
Nucleotide Protein
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