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RBBP4 RB binding protein 4, chromatin remodeling factor [ Crocodylus porosus (Australian saltwater crocodile) ]

Gene ID: 109318519, updated on 14-Mar-2024

Summary

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Gene symbol
RBBP4
Gene description
RB binding protein 4, chromatin remodeling factor
See related
Ensembl:ENSCPRG00005002354
Gene type
protein coding
RefSeq status
MODEL
Organism
Crocodylus porosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae; Crocodylus
Orthologs
human mouse all
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Genomic context

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See RBBP4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current CroPor_comp1 (GCF_001723895.1) Unplaced Scaffold NW_017728939.1 (8594865..8606343)

NW_017728939.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain-containing protein 8A-like Neighboring gene zinc finger and BTB domain containing 8A Neighboring gene zinc finger and BTB domain containing 8 opposite strand Neighboring gene syncoilin, intermediate filament protein Neighboring gene NHS like 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017728939.1 Unplaced Scaffold Reference CroPor_comp1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESC/E(Z) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of NuRD complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-binding protein RBBP4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crocodylus porosus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CroPor_comp1 Primary Assembly

Genomic

  1. NW_017728939.1 Reference CroPor_comp1 Primary Assembly

    Range
    8594865..8606343
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019547836.1 → XP_019403381.1  histone-binding protein RBBP4 isoform X1

    UniProtKB/TrEMBL
    A0A7M4E222
    Related
    ENSCPRP00005003203.1, ENSCPRT00005003749.1
    Conserved Domains (3) summary
    sd00039
    Location:128 → 175
    7WD40; WD40 repeat [structural motif]
    pfam12265
    Location:19 → 88
    CAF1C_H4-bd; Histone-binding protein RBBP4 or subunit C of CAF1 complex
    cl29593
    Location:122 → 403
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_019547837.1 → XP_019403382.1  histone-binding protein RBBP4 isoform X2

Nucleotide Protein
Heading Accession and Version

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