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PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 109488611, updated on 14-Mar-2024

Summary

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Gene symbol
PLCXD3
Gene description
phosphatidylinositol specific phospholipase C X domain containing 3
Locus tag
PANDA_021334
See related
Ensembl:ENSAMEG00000012336
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PLCXD3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 3 NC_048220.1 (115162814..115337020)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219955.1 (40988..44826)

Chromosome 3 - NC_048220.1Genomic Context describing neighboring genes Neighboring gene RAB7A interacting MON1-CCZ1 complex subunit 1 Neighboring gene 3-oxoacid CoA-transferase 1 Neighboring gene 40S ribosomal protein S4-like Neighboring gene beta-arrestin-2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphoric diester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PI-PLC X domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048220.1 Reference ASM200744v2 Primary Assembly

    Range
    115162814..115337020
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034656965.1 → XP_034512856.1  PI-PLC X domain-containing protein 3

    UniProtKB/TrEMBL
    A0A7N5JLR8, G1M0X0
    Related
    ENSAMEP00000027355.1, ENSAMET00000036553.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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