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LOC110120587 VISTA enhancer hs76 [ Homo sapiens (human) ]

Gene ID: 110120587, updated on 10-Dec-2024

Summary

Gene symbol
LOC110120587
Gene description
VISTA enhancer hs76
Gene type
biological region
Feature type(s)
regulatory: enhancer
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This locus represents a conserved genomic element that can function as an enhancer. It can activate a Hsp68 promoter coupled to a LacZ reporter gene in transgenic mice. [provided by RefSeq, Jun 2015]
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Genomic context

See LOC110120587 in Genome Data Viewer
Location:
chromosome: 16
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (51197210..51198451)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (56995087..56996328)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (51231121..51232362)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371253 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:51184378-51184878 Neighboring gene spalt like transcription factor 1 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr16:51188534-51189523 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:51189524-51190512 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:51214879-51215686 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:51215687-51216494 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:51324751-51325261 Neighboring gene uracil-DNA glycosylase pseudogene 1 Neighboring gene uncharacterized LOC107984886

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_053215.1 

    Range
    101..1342
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    51197210..51198451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    56995087..56996328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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