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LOC110841552 homeotic protein spalt-major-like [ Zootermopsis nevadensis ]

Gene ID: 110841552, updated on 21-Dec-2023

Summary

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Gene symbol
LOC110841552
Gene description
homeotic protein spalt-major-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootermopsis nevadensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Termopsidae; Zootermopsis
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Genomic context

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See LOC110841552 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ZooNev1.0 (GCF_000696155.1) Unplaced Scaffold NW_019059630.1 (173494..204770, complement)

NW_019059630.1Genomic Context describing neighboring genes Neighboring gene polycystic kidney disease 2-like 1 protein Neighboring gene uncharacterized LOC110841558 Neighboring gene uncharacterized LOC110841563 Neighboring gene uncharacterized LOC110841560 Neighboring gene clavesin-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019059630 Unplaced Scaffold Reference ZooNev1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: homeotic protein spalt-major-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zootermopsis nevadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZooNev1.0 Primary Assembly

Genomic

  1. NW_019059630.1 Reference ZooNev1.0 Primary Assembly

    Range
    173494..204770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022087226.1 → XP_021942918.1  LOW QUALITY PROTEIN: homeotic protein spalt-major-like

    Conserved Domains (5) summary
    smart00355
    Location:1135 → 1157
    ZnF_C2H2; zinc finger
    cd11674
    Location:1590 → 1665
    lambda-1; inner capsid protein lambda-1 or VP3
    sd00017
    Location:1077 → 1097
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1646 → 1666
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:1089 → 1114
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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