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CngB Cyclic nucleotide-gated ion channel subunit B [ Zootermopsis nevadensis ]

Gene ID: 110841575, updated on 15-May-2024

Summary

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Gene symbol
CngB
Gene description
Cyclic nucleotide-gated ion channel subunit B
Locus tag
L798_04342
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootermopsis nevadensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Termopsidae; Zootermopsis
Orthologs
fruit fly all
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Genomic context

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See CngB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current ZooNev1.0 (GCF_000696155.1) Unplaced Scaffold NW_019059551.1 (1067063..1217972)

NW_019059551.1Genomic Context describing neighboring genes Neighboring gene NEDD8-conjugating enzyme UBE2F-like Neighboring gene obscurin Neighboring gene uncharacterized LOC110841413 Neighboring gene uncharacterized LOC110826477 Neighboring gene neuromedin-B receptor-like Neighboring gene esterase E4-like Neighboring gene esterase FE4-like Neighboring gene prostaglandin reductase 1-like Neighboring gene uncharacterized LOC110841418 Neighboring gene venom serine carboxypeptidase-like Neighboring gene ras-related protein Rab6 Neighboring gene uncharacterized LOC110826632 Neighboring gene beta-arrestin protein kurtz

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019059551 Unplaced Scaffold Reference ZooNev1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cGMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables intracellularly cAMP-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables intracellularly cGMP-activated cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-containing complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic cation transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of intracellular cyclic nucleotide activated cation channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic nucleotide-gated cation channel beta-1; cyclic nucleotide-gated cation channel beta-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zootermopsis nevadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZooNev1.0 Primary Assembly

Genomic

  1. NW_019059551.1 Reference ZooNev1.0 Primary Assembly

    Range
    1067063..1217972
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022087254.1 → XP_021942946.1  cyclic nucleotide-gated cation channel beta-3 isoform X1

    Conserved Domains (1) summary
    cl26073
    Location:219 → 666
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_022087264.1 → XP_021942956.1  cyclic nucleotide-gated cation channel beta-3 isoform X2

    UniProtKB/TrEMBL
    A0A067RWV9
    Conserved Domains (1) summary
    cl26073
    Location:208 → 655
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_022057107.1 → XP_021912799.1  cyclic nucleotide-gated cation channel beta-3 isoform X4

    Conserved Domains (1) summary
    cl26073
    Location:206 → 653
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_022057101.1 → XP_021912793.1  cyclic nucleotide-gated cation channel beta-3 isoform X3

    Conserved Domains (1) summary
    cl26073
    Location:207 → 654
    Ank_2; Ankyrin repeats (3 copies)

  5. XM_022057125.1 → XP_021912817.1  cyclic nucleotide-gated cation channel beta-3 isoform X6

    Conserved Domains (1) summary
    cl26073
    Location:200 → 647
    Ank_2; Ankyrin repeats (3 copies)

  6. XM_022057117.1 → XP_021912809.1  cyclic nucleotide-gated cation channel beta-3 isoform X5

    Conserved Domains (1) summary
    cl26073
    Location:206 → 653
    Ank_2; Ankyrin repeats (3 copies)

  7. XM_022057150.1 → XP_021912842.1  cyclic nucleotide-gated cation channel beta-1 isoform X7

    Conserved Domains (1) summary
    cl26073
    Location:197 → 644
    Ank_2; Ankyrin repeats (3 copies)

  8. XM_022057131.1 → XP_021912823.1  cyclic nucleotide-gated cation channel beta-1 isoform X7

    Conserved Domains (1) summary
    cl26073
    Location:197 → 644
    Ank_2; Ankyrin repeats (3 copies)

  9. XM_022057140.1 → XP_021912832.1  cyclic nucleotide-gated cation channel beta-1 isoform X7

    Conserved Domains (1) summary
    cl26073
    Location:197 → 644
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
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