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Nf-YA nuclear factor Y-box A [ Zootermopsis nevadensis ]

Gene ID: 110841580, updated on 22-May-2024

Summary

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Gene symbol
Nf-YA
Gene description
nuclear factor Y-box A
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootermopsis nevadensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Termopsidae; Zootermopsis
Orthologs
fruit fly all
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Genomic context

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See Nf-YA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ZooNev1.0 (GCF_000696155.1) Unplaced Scaffold NW_019059631.1 (878599..888088)

NW_019059631.1Genomic Context describing neighboring genes Neighboring gene stress-induced protein 1-like Neighboring gene Homeodomain interacting protein kinase Neighboring gene uncharacterized LOC110826468

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019059631 Unplaced Scaffold Reference ZooNev1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCAAT-binding factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear transcription factor Y subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zootermopsis nevadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZooNev1.0 Primary Assembly

Genomic

  1. NW_019059631.1 Reference ZooNev1.0 Primary Assembly

    Range
    878599..888088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022087269.1 → XP_021942961.1  nuclear transcription factor Y subunit alpha isoform X1

    Conserved Domains (1) summary
    pfam02045
    Location:202 → 257
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  2. XM_022087268.1 → XP_021942960.1  nuclear transcription factor Y subunit alpha isoform X1

    Conserved Domains (1) summary
    pfam02045
    Location:202 → 257
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  3. XM_022087272.1 → XP_021942964.1  nuclear transcription factor Y subunit alpha isoform X2

    Conserved Domains (1) summary
    pfam02045
    Location:202 → 257
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  4. XM_022087271.1 → XP_021942963.1  nuclear transcription factor Y subunit alpha isoform X1

    Conserved Domains (1) summary
    pfam02045
    Location:202 → 257
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B

  5. XM_022087270.1 → XP_021942962.1  nuclear transcription factor Y subunit alpha isoform X1

    Conserved Domains (1) summary
    pfam02045
    Location:202 → 257
    CBFB_NFYA; CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
Nucleotide Protein
Heading Accession and Version

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