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SCD stearoyl-CoA desaturase [ Canis lupus dingo (dingo) ]

Gene ID: 112672195, updated on 15-Mar-2024

Summary

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Gene symbol
SCD
Gene description
stearoyl-CoA desaturase
See related
Ensembl:ENSCAFG00020008320
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human all
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Genomic context

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See SCD in Genome Data Viewer
Location:
chromosome: 28
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 28 NC_064270.1 (13233120..13249516)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 28 Unlocalized Scaffold NW_023365220.1 (13578201..13594592)

Chromosome 28 - NC_064270.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112672194 Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 2 Neighboring gene polycystin 2 like 1, transient receptor potential cation channel Neighboring gene uncharacterized LOC112672196 Neighboring gene 60S ribosomal protein L23a-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables stearoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in unsaturated fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stearoyl-CoA desaturase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064270.1 Reference ASM325472v2

    Range
    13233120..13249516
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025466898.3 → XP_025322683.1  stearoyl-CoA desaturase

    UniProtKB/TrEMBL
    A0A8C0K365, A0A8C0NMY4, A0A8I3P0C1, A0A8I3P0T0, A0A8P0SUX1
    Related
    ENSCAFP00020010273.1
    Conserved Domains (1) summary
    cd03505
    Location:101 → 338
    Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...
Nucleotide Protein
Heading Accession and Version

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