U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SDCBP syndecan binding protein [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112978661, updated on 15-Mar-2024

Summary

Gene symbol
SDCBP
Gene description
syndecan binding protein
See related
Ensembl:ENSARWG00000003494
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See SDCBP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020451271.1 (317274..333122)

NW_020451271.1Genomic Context describing neighboring genes Neighboring gene cholesterol 7-alpha-monooxygenase Neighboring gene UBX domain protein 2B Neighboring gene neutral sphingomyelinase activation associated factor Neighboring gene thymocyte selection associated high mobility group box Neighboring gene carbonic anhydrase 8

Genomic regions, transcripts, and products

Genomic Sequence:
NW_020451271 Unplaced Scaffold Reference aptRow1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020451271.1 Reference aptRow1

    Range
    317274..333122
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026092305.1XP_025948090.1  syntenin-1 isoform X2

    Conserved Domains (1) summary
    cd00992
    Location:111190
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
  2. XM_026092304.1XP_025948089.1  syntenin-1 isoform X1

    Related
    ENSARWP00000004827.1, ENSARWT00000005552.1
    Conserved Domains (1) summary
    cd00992
    Location:111190
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...