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ATU_RS11805 branched-chain amino acid ABC transporter substrate-binding protein [ Agrobacterium fabrum str. C58 ]

Gene ID: 1134460, updated on 27-Aug-2024

Summary

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Gene symbol
ATU_RS11805
Gene description
branched-chain amino acid ABC transporter substrate-binding protein
Locus tag
ATU_RS11805
Gene type
protein coding
Organism
Agrobacterium fabrum str. C58 (strain: C58, culture-collection: ATCC:33970, type-material: type strain of Agrobacterium fabrum)
Lineage
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex
Old locus tag
AGR_C_4394; Atu2422
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Genomic context

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Location:
chromosome: circular
Sequence:
Chromosome: circular; NC_003062.2 (2394505..2395623, complement)

Chromosome circular - NC_003062.2Genomic Context describing neighboring genes Neighboring gene AAA family ATPase Neighboring gene polysaccharide deacetylase family protein Neighboring gene DUF6867 family protein Neighboring gene ABC transporter ATP-binding protein Neighboring gene ABC transporter ATP-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003062.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Small RNA-mediated control of the Agrobacterium tumefaciens GABA binding protein. Wilms I, et al. Mol Microbiol, 2011 Apr. PMID 21320185
  2. Proline antagonizes GABA-induced quenching of quorum-sensing in Agrobacterium tumefaciens. Haudecoeur E, et al. Proc Natl Acad Sci U S A, 2009 Aug 25. PMID 19706545, Free PMC Article
  3. Cloning, purification, crystallization and preliminary X-ray analysis of a bacterial GABA receptor with a Venus flytrap fold. Moréra S, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2008 Dec 1. PMID 19052373, Free PMC Article
  4. X-ray structures of the leucine-binding protein illustrate conformational changes and the basis of ligand specificity. Magnusson U, et al. J Biol Chem, 2004 Mar 5. PMID 14672931
  5. The genome of the natural genetic engineer Agrobacterium tumefaciens C58. Wood DW, et al. Science, 2001 Dec 14. PMID 11743193

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AbcR1 inhibits initiation of atu2422 translation by masking its Shine-Dalgarno sequence and thereby reduces stability of the atu2422 transcript.
    Title: Small RNA-mediated control of the Agrobacterium tumefaciens GABA binding protein.
  2. Data show that a constructed atu2422 mutant was more virulent than the wild type bacterium.
    Title: Proline antagonizes GABA-induced quenching of quorum-sensing in Agrobacterium tumefaciens.
  3. Mature receptor Atu2422 (without its signal peptide) was overexpressed in Escherichia coli, purified and crystallized. A complete data set was collected to 1.35 A resolution at 100 K
    Title: Cloning, purification, crystallization and preliminary X-ray analysis of a bacterial GABA receptor with a Venus flytrap fold.
Submit: New GeneRIF Correction

General protein information

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Preferred Names
branched-chain amino acid ABC transporter substrate-binding protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003062.2 Reference assembly

    Range
    2394505..2395623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_006314984.1 MULTISPECIES: branched-chain amino acid ABC transporter substrate-binding protein [Rhizobium/Agrobacterium group]

    See identical proteins and their annotated locations for WP_006314984.1

    UniProtKB/TrEMBL
    A0A3G2D679, A0AA87ATU2, Q7CX36
Nucleotide Protein
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Research Materials